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How to make good resolutions

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Authors : Véber, Amandine (Author of the conference)
CIRM (Publisher )

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Abstract : In this presentation, we shall discuss the reconstruction of demographic parameters based on the genetic variability observed within a sample of individual DNA. In the family of models that we consider, the statistics describing this genetic diversity (number of mutations, distribution of the mutations amongst individuals in the sample) depend on a more or less coarse ‘resolution of (i.e., level of information on) the hidden genealogical tree that relates the sampled individuals. Considering the optimal resolution thus allows to greatly improve the exploration of the space of possible genealogies when computing the likelihood of demographic parameters, compared to classical methods based on full labelled trees such as Kingmans coalescent. We shall focus on two examples, based on works with Raazesh Sainudiin (Uppsala Univ.) and with Julia Palacios (Stanford Univ.), Sohini Ramachandran (Brown Univ.) and John Wakeley (Harvard Univ.).

MSC Codes :
60J10 - Markov chains (discrete-time Markov processes on discrete state spaces)
60J27 - Continuous-time Markov processes on discrete state spaces
92D15 - Problems related to evolution
92D20 - Protein sequences, DNA sequences

    Information on the Video

    Film maker : Hennenfent, Guillaume
    Language : English
    Available date : 28/06/2018
    Conference Date : 28/06/2018
    Subseries : Research talks
    arXiv category : Probability
    Mathematical Area(s) : Mathematics in Science & Technology ; Probability & Statistics
    Format : MP4 (.mp4) - HD
    Video Time : 00:52:26
    Targeted Audience : Researchers
    Download : https://videos.cirm-math.fr/2018-06-28_Veber.mp4

Information on the Event

Event Title : Probability and biological evolution / Probabilités et évolution biologique
Event Organizers : Pardoux, Etienne ; Wakolbinger, Anton
Dates : 25/06/2018 - 29/06/2018
Event Year : 2018
Event URL : https://conferences.cirm-math.fr/1774.html

Citation Data

DOI : 10.24350/CIRM.V.19418703
Cite this video as: Véber, Amandine (2018). How to make good resolutions. CIRM. Audiovisual resource. doi:10.24350/CIRM.V.19418703
URI : http://dx.doi.org/10.24350/CIRM.V.19418703

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