Authors : Véber, Amandine (Author of the conference)
CIRM (Publisher )
Abstract :
In this presentation, we shall discuss the reconstruction of demographic parameters based on the genetic variability observed within a sample of individual DNA. In the family of models that we consider, the statistics describing this genetic diversity (number of mutations, distribution of the mutations amongst individuals in the sample) depend on a more or less coarse ‘resolution of (i.e., level of information on) the hidden genealogical tree that relates the sampled individuals. Considering the optimal resolution thus allows to greatly improve the exploration of the space of possible genealogies when computing the likelihood of demographic parameters, compared to classical methods based on full labelled trees such as Kingmans coalescent. We shall focus on two examples, based on works with Raazesh Sainudiin (Uppsala Univ.) and with Julia Palacios (Stanford Univ.), Sohini Ramachandran (Brown Univ.) and John Wakeley (Harvard Univ.).
MSC Codes :
60J10
- Markov chains (discrete-time Markov processes on discrete state spaces)
60J27
- Continuous-time Markov processes on discrete state spaces
92D15
- Problems related to evolution
92D20
- Protein sequences, DNA sequences
Film maker : Hennenfent, Guillaume
Language : English
Available date : 28/06/2018
Conference Date : 28/06/2018
Subseries : Research talks
arXiv category : Probability
Mathematical Area(s) : Mathematics in Science & Technology ; Probability & Statistics
Format : MP4 (.mp4) - HD
Video Time : 00:52:26
Targeted Audience : Researchers
Download : https://videos.cirm-math.fr/2018-06-28_Veber.mp4
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Event Title : Probability and biological evolution / Probabilités et évolution biologique Event Organizers : Pardoux, Etienne ; Wakolbinger, Anton Dates : 25/06/2018 - 29/06/2018
Event Year : 2018
Event URL : https://conferences.cirm-math.fr/1774.html
DOI : 10.24350/CIRM.V.19418703
Cite this video as:
Véber, Amandine (2018). How to make good resolutions. CIRM. Audiovisual resource. doi:10.24350/CIRM.V.19418703
URI : http://dx.doi.org/10.24350/CIRM.V.19418703
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